A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv3155n152



Internal ID22818858
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr16:13198202..13198283hg38UCSC Ensembl
chr16:13292059..13292140hg19UCSC Ensembl
Cytoband16p13.12
Allele length
AssemblyAllele length
hg3882
hg1982
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv3225806, nsv3286091, nsv3283517
SamplesHG00512, NA19239, HG00732, NA19240, HG00733, HG00514
Known GenesSHISA9
MethodMerging
Sequencing
AnalysisMultiple analysis algorthms
PhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformIllumina HiSeq
See merged experiments
Comments
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)dgv3155n152
Frequency
Sample Size9
Observed Gain0
Observed Loss6
Observed Complex0
Frequencyn/a


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