A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv305e201



Internal ID22759663
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:60815806..60816903hg38UCSC Ensembl
chr15:61108005..61109102hg19UCSC Ensembl
Cytoband15q22.2
Allele length
AssemblyAllele length
hg381098
hg191098
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2749758, esv2749756
SamplesSSM059, SSM008, SSM071, SSM027, SSM024, SSM011, SSM064, SSM065, SSM087, SSM038, SSM039, SSM009, SSM073, SSM093, SSM050, SSM088, SSM002, SSM023, SSM058, SSM028, SSM092, SSM084, SSM090, SSM021, SSM047, SSM061, SSM029, SSM062, SSM026, SSM019, SSM032, SSM031, SSM067, SSM001, SSM014, SSM033, SSM066, SSM085, SSM040, SSM072, SSM082, SSM020, SSM007, SSM078, SSM053, SSM037, SSM077, SSM076, SSM010, SSM091, SSM055, SSM070, SSM095, SSM025, SSM034, SSM004, SSM099, SSM043, SSM056, SSM063, SSM012
Known GenesRORA
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)dgv305e201
Frequency
Sample Size96
Observed Gain0
Observed Loss61
Observed Complex0
Frequencyn/a


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