Variant DetailsVariant: dgv29n111Internal ID | 20163758 | Landmark | | Location Information | | Cytoband | 1q44 | Allele length | Assembly | Allele length | hg38 | 107713 | hg19 | 107713 |
| Variant Type | CNV deletion | Copy Number | | Allele State | | Allele Origin | | Probe Count | | Validation Flag | | Merged Status | M | Merged Variants | | Supporting Variants | nsv1160545, nsv1160538, nsv1160544, nsv1160484, nsv1160489 | Samples | | Known Genes | OR2T10, OR2T11, OR2T27, OR2T29, OR2T34, OR2T35 | Method | SNP array | Analysis | 1) We applied common software Birdsuite to detect genome-wide CNVs; 2) we used our algorithm WinXPCNVer which is based on probe intensity to identify Tibetan specific CNV; 3) we further genotyped the discovered Tibetan specific CNV by K-means and manual observation. | Platform | Affymetrix SNP Array 6.0 | Comments | | Reference | Lou_et_al_2015 | Pubmed ID | 26073780 | Accession Number(s) | dgv29n111
| Frequency | Sample Size | 369 | Observed Gain | 0 | Observed Loss | 34 | Observed Complex | 0 | Frequency | n/a |
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