A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv288n27



Internal ID22767017
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:23403645..23530397hg38UCSC Ensembl
chr15:23648792..23775544hg19UCSC Ensembl
chr15:21200233..21326637hg18UCSC Ensembl
chr15:21200233..21326637hg17UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg38126753
hg19126753
hg18126405
hg17126405
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv456641, nsv456642, nsv456639
SamplesHGDP01063, HGDP01072, HGDP01074
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)dgv288n27
Frequency
Sample Size1557
Observed Gain3
Observed Loss0
Observed Complex0
Frequencyn/a


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