A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv2876n100



Internal ID22788963
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr16:32401900..34024583hg38UCSC Ensembl
chr16:32413221..33827050hg19UCSC Ensembl
chr16:32320722..33734551hg18UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg381622684
hg191413830
hg181413830
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv1059167, nsv1061564, nsv1060096, nsv1065402, nsv1059844, nsv1059879, nsv1058451, nsv1058190, nsv1066183, nsv1060456, nsv1060314, nsv1067317, nsv1061804, nsv1062845, nsv1061329, nsv1065498, nsv1059517, nsv1060037, nsv1063893, nsv1056115, nsv1067493, nsv1056731, nsv1058085, nsv1064029, nsv1066152, nsv1055521, nsv1063728, nsv1056933
Samples
Known GenesLOC390705, RNU6-76P, SLC6A10P, TP53TG3, TP53TG3B, TP53TG3C
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)dgv2876n100
Frequency
Sample Size11257
Observed Gain0
Observed Loss31
Observed Complex0
Frequencyn/a


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