A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv2872n166



Internal ID20168300
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrX:23852604..23917420hg38UCSC Ensembl
chrX:23870721..23935537hg19UCSC Ensembl
CytobandXp22.11
Allele length
AssemblyAllele length
hg3864817
hg1964817
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv4043168, nsv4047930
Samples
Known GenesAPOO, CXorf58
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)dgv2872n166
Frequency
Sample Size10847
Observed Gain2
Observed Loss0
Observed Complex0
Frequencyn/a


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