A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv2842n100



Internal ID22788929
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr16:31995127..33952512hg38UCSC Ensembl
chr16:32006448..33754979hg19UCSC Ensembl
chr16:31913949..33662480hg18UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg381957386
hg191748532
hg181748532
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv1064113, nsv1056226, nsv1066362, nsv1065239, nsv1057666, nsv1066771, nsv1064520, nsv1061966, nsv1058908, nsv1058205, nsv1056375, nsv1058082, nsv1061664, nsv1055445, nsv1060775, nsv1056688, nsv1058865, nsv1056017, nsv1059438
Samples
Known GenesHERC2P4, LOC390705, RNU6-76P, SLC6A10P, TP53TG3, TP53TG3B, TP53TG3C, TP53TG3D
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)dgv2842n100
Frequency
Sample Size11257
Observed Gain0
Observed Loss20
Observed Complex0
Frequencyn/a


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