A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv2841n100



Internal ID22788928
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr16:31986849..32944737hg38UCSC Ensembl
chr16:31998170..32956058hg19UCSC Ensembl
chr16:31905671..32863559hg18UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg38957889
hg19957889
hg18957889
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv1064461, nsv1063122, nsv1057254, nsv1056746, nsv1061474, nsv1067090, nsv1058828, nsv1067239, nsv1062199, nsv1062792, nsv1066652, nsv1061520, nsv1064661, nsv1058508, nsv1062844, nsv1064003, nsv1063972, nsv1056741, nsv1065083, nsv1067067, nsv1060944, nsv1067445, nsv1061635, nsv1060168
Samples
Known GenesHERC2P4, LOC390705, SLC6A10P, TP53TG3, TP53TG3B, TP53TG3C, TP53TG3D
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)dgv2841n100
Frequency
Sample Size11257
Observed Gain0
Observed Loss27
Observed Complex0
Frequencyn/a


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