A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv2840n100



Internal ID20154456
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr16:31960187..34208804hg38UCSC Ensembl
chr16:31971508..34011271hg19UCSC Ensembl
chr16:31879009..33918772hg18UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg382248618
hg192039764
hg182039764
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv1057664, nsv1055582, nsv1055261, nsv1066168, nsv1063161, nsv1062181, nsv1067297, nsv1065187, nsv1060790, nsv1067295, nsv1064716, nsv1065820, nsv1062947, nsv1061829, nsv1059977, nsv1057496, nsv1055539, nsv1064553, nsv1061494, nsv1057591, nsv1065880, nsv1058568, nsv1059016, nsv1056438, nsv1058300, nsv1066147, nsv1062921, nsv1059124, nsv1064338, nsv1063061, nsv1065975, nsv1059097, nsv1057091, nsv1063167, nsv1066954, nsv1065766, nsv1063882, nsv1066198, nsv1056972, nsv1058646, nsv1066885, nsv1065441, nsv1056337, nsv1067543, nsv1063514, nsv1057668, nsv1058839, nsv1061226, nsv1061556, nsv1060035, nsv1065457, nsv1057273, nsv1063176, nsv1060842, nsv1058455, nsv1066641, nsv1055482, nsv1066961, nsv1056070, nsv1056580, nsv1057245
Samples
Known GenesHERC2P4, LINC00273, LOC390705, RNU6-76P, SLC6A10P, TP53TG3, TP53TG3B, TP53TG3C, TP53TG3D
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)dgv2840n100
Frequency
Sample Size29084
Observed Gain124
Observed Loss0
Observed Complex0
Frequencyn/a


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