A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv277n21



Internal ID20131998
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr3:9390066..9453435hg38UCSC Ensembl
chr3:9431750..9495119hg19UCSC Ensembl
chr3:9406750..9470119hg18UCSC Ensembl
chr3:9406750..9470119hg17UCSC Ensembl
Cytoband3p25.3
Allele length
AssemblyAllele length
hg3863370
hg1963370
hg1863370
hg1763370
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv526039, nsv525436
Samples
Known GenesSETD5, SETD5-AS1
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)dgv277n21
Frequency
Sample Size2026
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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