A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv2667n166



Internal ID20168095
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:54010..586788hg38UCSC Ensembl
chr9:54010..586788hg19UCSC Ensembl
Cytoband9p24.3
Allele length
AssemblyAllele length
hg38532779
hg19532779
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv4164516, nsv4167708
Samples
Known GenesC9orf66, CBWD1, DOCK8, FOXD4, KANK1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)dgv2667n166
Frequency
Sample Size10847
Observed Gain2
Observed Loss0
Observed Complex0
Frequencyn/a


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