A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv265n111



Internal ID20163994
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr8:15553858..15583077hg38UCSC Ensembl
chr8:15411367..15440586hg19UCSC Ensembl
Cytoband8p22
Allele length
AssemblyAllele length
hg3829220
hg1929220
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv1161738, nsv1161737
Samples
Known GenesTUSC3
MethodSNP array
Analysis1) We applied common software Birdsuite to detect genome-wide CNVs; 2) we used our algorithm WinXPCNVer which is based on probe intensity to identify Tibetan specific CNV; 3) we further genotyped the discovered Tibetan specific CNV by K-means and manual observation.
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceLou_et_al_2015
Pubmed ID26073780
Accession Number(s)dgv265n111
Frequency
Sample Size369
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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