A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv2557n100



Internal ID20154173
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:34403109..34538731hg38UCSC Ensembl
chr15:34695310..34830932hg19UCSC Ensembl
chr15:32482602..32618224hg18UCSC Ensembl
Cytoband15q14
Allele length
AssemblyAllele length
hg38135623
hg19135623
hg18135623
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv1050707, nsv1054694, nsv1051464, nsv1040063, nsv1047522, nsv1052855, nsv1043729, nsv1050506, nsv1053515, nsv1039334, nsv1050490, nsv1039836, nsv1049642, nsv1053994, nsv1046143, nsv1054752, nsv1052479, nsv1045942, nsv1044742, nsv1043997, nsv1045896, nsv1052218, nsv1048738
Samples
Known GenesGOLGA8A, GOLGA8B, MIR1233-1, MIR1233-2
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)dgv2557n100
Frequency
Sample Size29084
Observed Gain0
Observed Loss137
Observed Complex0
Frequencyn/a


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