A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv2545n71



Internal ID6320165
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr16:1912021..2779236hg19UCSC Ensembl
chr16:1852022..2719237hg18UCSC Ensembl
Cytoband16p13.3
Allele length
AssemblyAllele length
hg19n/a
hg18n/a
Variant TypeCNV Loss
Copy Number
Allele State
Allele Origin
Probe Count
Merged StatusM
Merged Variants
Supporting Variantsnsv905052, nsv905047
SamplesMS10311, IS33504
Known GenesABCA17P, ABCA3, AMDHD2, ATP6V0C, C16orf59, C16orf73, C16orf79, CASKIN1, CCNF, CEMP1, DNASE1L2, E4F1, ECI1, FLJ42627, GFER, HS3ST6, KCTD5, LINC00254, LOC100507321, LOC652276, MIR1225, MIR3178, MIR3180-5, MIR3677, MIR4516, MIR4717, MIR940, MLST8, NDUFB10, NOXO1, NPW, NTHL1, NTN3, PDPK1, PGP, PKD1, PRSS27, RAB26, RNF151, RNPS1, RPL3L, RPS2, SEPX1, SLC9A3R2, SNHG9, SNORA10, SNORA64, SNORA78, SNORD60, SYNGR3, TBC1D24, TBL3, TRAF7, TSC2, ZNF598
Method
Analysis
Platform
Comments
ReferenceXu_et_al_2011
Pubmed ID21882294
Accession Number(s)dgv2545n71
Frequency
Sample Size6533
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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