A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv2538n100



Internal ID19012906
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:32137654..32637651hg38UCSC Ensembl
chr15:32429855..32929852hg19UCSC Ensembl
chr15:30217147..30717144hg18UCSC Ensembl
Cytoband15q13.3
Allele length
AssemblyAllele length
hg38499998
hg19499998
hg18499998
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv1048426, nsv1048688, nsv1042571, nsv1037873, nsv1044092, nsv1043833, nsv1048864, nsv1046929, nsv1045914, nsv1036250, nsv1047224, nsv1051599, nsv1047745, nsv1035720, nsv1047602, nsv1040930, nsv1048261, nsv1039486, nsv1037095, nsv1046512
Samples
Known GenesARHGAP11A, CHRNA7, GOLGA8K, GOLGA8O, GOLGA8R, LOC100996255, ULK4P1, ULK4P2, ULK4P3, WHAMMP1
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)dgv2538n100
Frequency
Sample Size29084
Observed Gain0
Observed Loss48
Observed Complex0
Frequencyn/a


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