Variant DetailsVariant: dgv249n111Internal ID | 20163978 | Landmark | | Location Information | | Cytoband | 7q35 | Allele length | Assembly | Allele length | hg38 | 208642 | hg19 | 208642 |
| Variant Type | CNV duplication | Copy Number | | Allele State | | Allele Origin | | Probe Count | | Validation Flag | | Merged Status | M | Merged Variants | | Supporting Variants | nsv1161640, nsv1161637, nsv1161629, nsv1161628, nsv1161639, nsv1161638, nsv1161630, nsv1161635 | Samples | | Known Genes | CTAGE15, EPHA1-AS1, FAM115C | Method | SNP array | Analysis | 1) We applied common software Birdsuite to detect genome-wide CNVs; 2) we used our algorithm WinXPCNVer which is based on probe intensity to identify Tibetan specific CNV; 3) we further genotyped the discovered Tibetan specific CNV by K-means and manual observation. | Platform | Affymetrix SNP Array 6.0 | Comments | | Reference | Lou_et_al_2015 | Pubmed ID | 26073780 | Accession Number(s) | dgv249n111
| Frequency | Sample Size | 369 | Observed Gain | 9 | Observed Loss | 0 | Observed Complex | 0 | Frequency | n/a |
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