Variant DetailsVariant: dgv21e213 Internal ID | 20151568 | Landmark | | Location Information | | Cytoband | 15q14 | Allele length | Assembly | Allele length | hg38 | 183947 | hg19 | 183947 | hg18 | 183947 |
| Variant Type | CNV loss | Copy Number | | Allele State | | Allele Origin | | Probe Count | | Validation Flag | | Merged Status | M | Merged Variants | | Supporting Variants | esv3584691, esv3584690, esv3584692, esv3584693 | Samples | OA062, 2RB, OA017, B4, OA2A, OA092, KSM008, 1WS, OA053, OA074, KSM003, OA020, KSF024, KSF008, OA016, B10, OA018b, 3LK | Known Genes | GOLGA8A, GOLGA8B, MIR1233-1, MIR1233-2 | Method | SNP array | Analysis | We applied stringent filtering criteria such that CNV had to be a minimum of 1 kb and span 5 consecutive probes, and be detected by at least 2 out of the 3 algorithms. In addition we excluded CNVs that were on the X and Y-chromosomes, or approximately 300 kb adjacent to the centromeres and telomeres. | Platform | Affymetrix Genome-Wide Human SNP Array 6.0 | Comments | | Reference | Mokhtar_et_al_2014 | Pubmed ID | 24956385 | Accession Number(s) | dgv21e213
| Frequency | Sample Size | 34 | Observed Gain | 0 | Observed Loss | 18 | Observed Complex | 0 | Frequency | n/a |
|
|