A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv2183n100



Internal ID22788270
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:19985576..22472558hg38UCSC Ensembl
chr15:20190829..22751770hg19UCSC Ensembl
chr15:18450843..20303134hg18UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg382486983
hg192560942
hg181852292
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv1044116, nsv1047063, nsv1052118, nsv1054799, nsv1038803, nsv1041504, nsv1035595, nsv1040821, nsv1035262, nsv1035738, nsv1039698, nsv1042931, nsv1036232, nsv1039561
Samples
Known GenesCHEK2P2, CT60, CXADRP2, GOLGA6L1, GOLGA6L6, GOLGA8CP, GOLGA8DP, HERC2P3, LOC646214, LOC727924, MIR4509-1, MIR4509-2, MIR4509-3, NBEAP1, NF1P2, OR4M2, OR4N3P, OR4N4, POTEB, POTEB2, REREP3
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)dgv2183n100
Frequency
Sample Size11257
Observed Gain0
Observed Loss26
Observed Complex0
Frequencyn/a


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