A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv2181n100



Internal ID22788268
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:19978836..22300068hg38UCSC Ensembl
chr15:20184089..22588019hg19UCSC Ensembl
chr15:18444103..20089383hg18UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg382321233
hg192403931
hg181645281
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv1041428, nsv1047472, nsv1045513, nsv1040406, nsv1038520, nsv1043397, nsv1047970, nsv1035286, nsv1048125, nsv1050625, nsv1041378, nsv1054154, nsv1048522, nsv1043981, nsv1042016, nsv1049854, nsv1050052, nsv1036650, nsv1048841, nsv1052023, nsv1048022, nsv1044810, nsv1043131, nsv1047348, nsv1041135, nsv1047525, nsv1040933, nsv1041951, nsv1040492, nsv1040520, nsv1044333, nsv1047408, nsv1038346, nsv1036502, nsv1039407, nsv1043490, nsv1053684, nsv1054245, nsv1046295, nsv1043628, nsv1051089, nsv1035742, nsv1053223, nsv1048974, nsv1051237, nsv1040745, nsv1049187, nsv1047292, nsv1051296, nsv1044377, nsv1052341, nsv1042148, nsv1046677, nsv1042922, nsv1041676, nsv1035711, nsv1037852, nsv1051588, nsv1054117, nsv1054409, nsv1049222, nsv1049991, nsv1044776, nsv1047155, nsv1046972, nsv1036530, nsv1039181, nsv1035954, nsv1046135, nsv1037327, nsv1044196, nsv1050255, nsv1052686, nsv1054550, nsv1047899, nsv1038566, nsv1052500, nsv1042111, nsv1040471, nsv1035609, nsv1053107, nsv1052193, nsv1047780, nsv1054201, nsv1052894, nsv1035730, nsv1041522, nsv1041570
Samples
Known GenesCHEK2P2, CT60, CXADRP2, GOLGA6L6, GOLGA8CP, HERC2P3, LOC646214, LOC727924, NBEAP1, NF1P2, OR4M2, OR4N3P, OR4N4, POTEB, POTEB2, REREP3
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)dgv2181n100
Frequency
Sample Size11257
Observed Gain134
Observed Loss0
Observed Complex0
Frequencyn/a


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