A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv1906n54



Internal ID20135330
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:55572353..55693312hg38UCSC Ensembl
chr11:55339829..55460788hg19UCSC Ensembl
chr11:55096405..55217364hg18UCSC Ensembl
Cytoband11q11
Allele length
AssemblyAllele length
hg38120960
hg19120960
hg18120960
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv554813, nsv554804, nsv554802, nsv554812, nsv554902, nsv554811, nsv554810, nsv554835, nsv554901
SamplesHGDP00143, HGDP00908, NINDS_116, HGDP00759, HGDP00511, NINDS_257, 1782681210_A, 1798860371_A, HGDP01047, 1782681144_A, HGDP00210, HGDP00226, HGDP01238, HGDP01241, HGDP00791, 1780862415_A, HGDP00881, HGDP00537, NINDS_247, 1780854100_A, HGDP00617, HGDP00525, HGDP00520, HGDP00057, 1782681378_A, NINDS_162, 1780862071_A, HGDP00674, HGDP00820, HGDP00775, HGDP01021, HGDP00532, NINDS_256, NINDS_42, HGDP00106, NINDS_31, 1787431166_A, HGDP00587, HGDP00082, HGDP01345, 1780862261_A, HGDP01331, HGDP01302, HGDP01359, HGDP01318, HGDP00552, HGDP00909, HGDP00157, 1780854533_A, HGDP00643, HGDP01322, HGDP01201, NINDS_131, NINDS_127, 1780862394_A, HGDP00564, HGDP01282
Known GenesOR4C11, OR4C16, OR4C6, OR4P4, OR4S2
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)dgv1906n54
Frequency
Sample Size17421
Observed Gain31
Observed Loss121
Observed Complex0
Frequencyn/a


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