A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv1906n54



Internal ID20135330
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:55572353..55693312hg38UCSC Ensembl
chr11:55339829..55460788hg19UCSC Ensembl
chr11:55096405..55217364hg18UCSC Ensembl
Cytoband11q11
Allele length
AssemblyAllele length
hg38120960
hg19120960
hg18120960
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv554802, nsv554901, nsv554812, nsv554813, nsv554811, nsv554810, nsv554804, nsv554835, nsv554902
SamplesHGDP00617, HGDP00511, HGDP00157, HGDP00525, HGDP00552, NINDS_247, HGDP00532, HGDP01241, HGDP00759, HGDP00106, HGDP00775, HGDP01345, 1780862394_A, HGDP01302, HGDP00791, NINDS_127, HGDP00909, HGDP00643, 1780862261_A, HGDP00820, HGDP00082, HGDP01318, NINDS_116, NINDS_162, HGDP01021, HGDP00587, HGDP01322, HGDP00210, HGDP01201, NINDS_256, 1787431166_A, HGDP01238, NINDS_257, HGDP01282, HGDP00226, HGDP00057, HGDP00564, 1780854533_A, 1780854100_A, HGDP01331, HGDP00908, NINDS_42, HGDP01359, 1782681144_A, HGDP00881, 1780862415_A, 1780862071_A, NINDS_31, 1798860371_A, HGDP00537, 1782681378_A, HGDP00143, HGDP01047, NINDS_131, HGDP00674, 1782681210_A, HGDP00520
Known GenesOR4C11, OR4C16, OR4C6, OR4P4, OR4S2
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)dgv1906n54
Frequency
Sample Size17421
Observed Gain31
Observed Loss121
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer