A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv18n29



Internal ID18991987
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrY:6164572..6334031hg38UCSC Ensembl
chrY:6032613..6202072hg19UCSC Ensembl
chrY:6092613..6262072hg18UCSC Ensembl
chrY:5735569..5905028hg16UCSC Ensembl
CytobandYp11.2
Allele length
AssemblyAllele length
hg38169460
hg19169460
hg18169460
hg16169460
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv469743, nsv469876
Samples
Known GenesTSPY2, TTTY23, TTTY23B
MethodBAC aCGH
AnalysisA locus was considered a CNV if the log ratio of fluorescence measurements for the individuals assayed exceeded twice the SD of the autosomal clones in both dye-swapped experiments.
PlatformGPL4010
Comments
ReferenceLocke_et_al_2006
Pubmed ID16826518
Accession Number(s)dgv18n29
Frequency
Sample Size265
Observed Gain0
Observed Loss7
Observed Complex0
Frequencyn/a


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