A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv167n27



Internal ID22766896
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:98940429..98965361hg38UCSC Ensembl
chr11:98811159..98836091hg19UCSC Ensembl
chr11:98316369..98341301hg18UCSC Ensembl
chr11:98316369..98341301hg17UCSC Ensembl
Cytoband11q22.1
Allele length
AssemblyAllele length
hg3824933
hg1924933
hg1824933
hg1724933
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv468822, nsv468821
SamplesHGDP00003, HGDP01414
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)dgv167n27
Frequency
Sample Size1557
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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