A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv166n27



Internal ID22766895
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:91222804..91265428hg38UCSC Ensembl
chr11:90955972..90998596hg19UCSC Ensembl
chr11:90595620..90638244hg18UCSC Ensembl
chr11:90595620..90638244hg17UCSC Ensembl
Cytoband11q14.3
Allele length
AssemblyAllele length
hg3842625
hg1942625
hg1842625
hg1742625
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv468790, nsv468791
Samples1780862310_A, 1780854459_A
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)dgv166n27
Frequency
Sample Size1557
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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