A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv1614n166



Internal ID22801513
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr3:9899859..9905780hg38UCSC Ensembl
chr3:9941543..9947464hg19UCSC Ensembl
Cytoband3p25.3
Allele length
AssemblyAllele length
hg385922
hg195922
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv4076791, nsv4073991
Samples
Known GenesIL17RE
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)dgv1614n166
Frequency
Sample Size10847
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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