A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv1398e199



Internal ID22759171
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrX:44439399..44447246hg38UCSC Ensembl
chrX:44298645..44306492hg19UCSC Ensembl
CytobandXp11.3
Allele length
AssemblyAllele length
hg387848
hg197848
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2671564, esv2674954, esv2661441
SamplesNA18502, HG00650, HG00442, NA19058, HG00608, NA18947, NA19664, NA19399, NA12414, NA12843, NA11931, NA18999, NA12751, NA18504, NA19684, HG01461, NA19920, NA12750, NA19067, NA12813, NA19446, NA19171, HG01350, HG00589, HG01492, NA18960, NA18916, NA07048, NA11918, HG01365, NA19384, HG00537, NA20291, NA19079, NA18949, HG00512, NA19720, NA18868, NA19172, NA18985, NA19985, NA18867, HG01550, NA19789, NA19921, NA12777, NA18951, NA12489, NA19070, NA19056, HG00657, NA19717, NA19663, NA19081, HG01498, NA12718, NA18948, NA18981, HG00692, NA19064, NA18907, NA19084, HG00690, HG00404, NA12829, NA11893, NA19750, NA19453, NA06989, NA19059, NA19009, NA19452, NA19682, NA18523, HG00463, NA19318, NA12778, NA19395, NA19625, NA19729, HG00611, NA19652, NA19440, NA19256, NA18517, NA19712, NA19434, HG00580, NA19444, NA19331, NA19010, NA19470, NA19428, NA19083, NA18943, NA20281, NA19360, HG00662, HG01342, NA12347, NA19328, HG00614, HG00513, HG00478, NA19785, NA19223, NA19779, NA19102, HG00595, NA18989, NA19129, HG00628, NA19065, NA19429, NA19074, NA18487, HG01437, HG00581, NA19431, NA11832, HG00593, HG00626, NA19648, NA19700, HG00592, NA19055, NA19397, NA18924, NA19466, HG01359, NA18980, NA18507, NA11933, HG01389, HG01374, NA12045, HG00699, NA19819, NA12004, NA12058, NA20346, NA19190, NA19098, NA12413, NA12341, NA19068, HG01250, NA19746, NA19660, NA19076, NA18489, NA19728, HG00702, HG00689, NA19723, NA19916, HG00634, NA19131, NA18942, HG00610, NA19197, HG01354, NA19313, NA12287, NA19054, NA18498, NA19681, NA20336, HG00590, NA12761, HG01134, NA12282, NA19651, HG00683, NA19719, NA20340, NA19371, NA19075, NA19471, NA19087, NA12889, NA19159, NA19002, NA19725, NA19189, NA18520, NA19209, NA12828, NA18908, NA18973, HG00530, HG00419, NA19451, NA12748, HG00464, NA19007, HG00543, HG01136, HG00560, NA19247, HG00629, NA19657, HG01360, NA19082, NA19707, HG01384, NA12342, NA19077, HG00428, NA19462, NA19347, NA19391, NA19327, HG00475, NA19982, HG00584, HG00500, NA19788, NA18910, NA18976, NA19776, NA19000, NA19655, NA18499, HG01383, NA18853, NA20282, NA19225, NA19756, NA19160, NA20296, NA19685, NA19401, HG00476, NA11881, NA19834, NA19108, NA18952, NA12775, HG00565, NA18950, NA19732, HG01253, NA07051, HG00607, NA19786, NA20341, NA19818, NA19759, NA19376, NA19078, HG00707, HG00672, HG00578, NA19248, NA19438, NA19472, NA18987, NA12749, NA19713, NA12830, NA19726, NA18972, HG01377, NA18984, HG00472, NA18505, NA19004, HG00437, NA19153, NA19394, NA12383, NA19701, HG00542, NA12717, NA12842, NA19703, HG01462, NA19909, HG00671, NA19066, NA19204, NA18861, NA18508, NA10851, HG00559, NA12273, NA19350, NA19359, NA20294, NA19355, NA12340, NA20332, NA18959, HG00449, HG00654, NA19443, NA20356, NA18510, NA12399, HG00693, NA18988, NA19107, HG00663, NA07346, NA19373, NA18940, NA18519, NA19319, HG01351, NA18923, NA19062, NA07347, NA19457, NA20287, NA19904, NA19130, NA11930, NA12275, NA20278, NA12156, NA11932, NA19372, NA12044, NA11994, HG00534, NA19235, NA19207, HG00705, NA19722, NA18990, NA20342, NA20127, HG01124, NA19908, HG00443, NA19403, HG00557, NA19455, NA20314, HG00556, HG00583, NA18871, HG01149, NA19654, NA19461, NA11919, HG00651, HG00531, HG00479, HG00684, NA18912, HG01497, NA19099, NA19761, NA18963, HG00704, NA12144, NA19469, NA18858, NA12546, NA19012, NA18974, NA12043, NA18953, HG01148, NA19375, NA19003, NA19390, NA19147, HG00625, NA20276, NA19747, NA19072, NA12272, HG01551, HG01357, NA19835, HG00473, NA19679, NA19324, NA19311, HG01113, HG01137, NA19783, HG00418, HG01489, HG00620, NA18501, NA06994, NA19716, NA19468, NA19474, NA19093, NA20289, NA11843, NA19116, NA19080, NA19780, NA19711, NA19900, NA18983, NA19430, NA11892, NA19316, NA19312, HG01125, NA18968, NA12006, NA19463, NA19063, NA12154, NA19346, NA19676, HG00403, NA11830, HG01356, HG00536, NA11829, HG00524, NA19914, NA19332, NA18917, NA18486, HG01465, NA19393, NA19777, NA19057, HG01456, HG00566, NA18870, NA12155, NA07357, HG01140, NA18967, NA19374, NA19396, NA19381, NA19005, NA18944, HG01366, NA19201, HG00501, NA19382, NA19762, NA19448, HG01488, HG00448, NA19119, NA18982, NA19198, NA20317, NA11992, NA19771, NA19088, NA19138, NA19782, NA18964, NA19404, HG01455, NA19383, NA18874, NA06984, NA18977, HG01495, NA19917, NA19137, NA19731, NA19385, HG00422, NA19317, NA18986, HG01440, HG00427, NA19901, NA19456, NA19445, NA18975, NA19200, NA11831, NA10847, HG01353, NA19437, NA18934, HG00596, NA12003, NA19152, HG00653, HG00577, NA18956, HG00701, NA19236, NA18516, HG00436, HG00533, NA20126, HG00619, HG00708, HG00635, HG01390, NA19114, NA20299, NA19774, NA19449, NA18856, NA12249, HG00613, HG00525, NA12827, NA19338, NA19257, NA18945, NA19436, NA12716, NA18909, NA19321, NA18961, NA19473, NA19435, NA18941, NA19773, NA19380, NA19144, NA19334, HG01494, NA19439, NA19467, NA07037, NA19085, NA06986, NA19398, NA20348, NA18971, HG01491, NA19060, HG00421, HG00656, NA20334, HG01254, HG00698, NA19213, HG01251, NA19661, HG01378, NA19755, NA19758, NA18511, NA07000, NA18522, HG01112, NA12776, NA18965
Known Genes
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)dgv1398e199
Frequency
Sample Size1151
Observed Gain0
Observed Loss552
Observed Complex0
Frequencyn/a


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