A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv137e201



Internal ID20125024
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:45101473..45102709hg38UCSC Ensembl
chr11:45123024..45124260hg19UCSC Ensembl
Cytoband11p11.2
Allele length
AssemblyAllele length
hg381237
hg191237
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2742842, esv2741093, esv2744421, esv2742715, esv2741363, esv2740743, esv2743277, esv2741312, esv2741442, esv2741336, esv2744422, esv2743009
SamplesSSM059, SSM008, SSM083, SSM027, SSM013, SSM050, SSM088, SSM002, SSM057, SSM058, SSM092, SSM021, SSM047, SSM018, SSM069, SSM061, SSM029, SSM062, SSM089, SSM017, SSM031, SSM001, SSM014, SSM086, SSM066, SSM006, SSM085, SSM072, SSM078, SSM053, SSM022, SSM010, SSM055, SSM043, SSM052, SSM049, SSM056, SSM030, SSM012
Known GenesPRDM11
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)dgv137e201
Frequency
Sample Size96
Observed Gain0
Observed Loss39
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer