A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv1338e201



Internal ID22760696
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrY:26667071..26670861hg38UCSC Ensembl
chrY:28813218..28817008hg19UCSC Ensembl
CytobandYq12
Allele length
AssemblyAllele length
hg383791
hg193791
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2741272, esv2740705, esv2740824
SamplesSSM046, SSM093, SSM096, SSM062, SSM094, SSM032, SSM031, SSM081, SSM082, SSM080, SSM037, SSM076, SSM099
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)dgv1338e201
Frequency
Sample Size96
Observed Gain0
Observed Loss13
Observed Complex0
Frequencyn/a


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