A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv1338e199



Internal ID22759111
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:39823727..39839474hg38UCSC Ensembl
chr9:41968745..41984492hg19UCSC Ensembl
Cytoband9p12
Allele length
AssemblyAllele length
hg3815748
hg1915748
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2662901, esv2669960
SamplesNA20588, HG00189, HG00442, NA19058, NA20529, HG00142, NA18947, NA19664, NA12414, NA11920, NA11931, HG00257, NA18999, HG00233, NA20512, NA19684, NA18530, HG01518, HG01461, NA19920, NA18633, NA12750, NA20806, NA19067, HG00337, HG00138, NA20798, NA20589, NA19678, HG01167, NA20756, NA18558, NA18547, HG01492, NA18618, NA18574, NA07048, NA11918, HG01083, HG01365, HG00537, HG00311, NA19079, NA18949, HG00158, HG00512, HG00281, HG00139, NA19720, HG00335, HG01519, HG00326, NA20757, HG01550, NA19789, NA20755, NA19921, HG00137, NA18951, NA18605, NA20535, NA12489, HG00731, NA20800, NA18538, NA19056, NA20521, HG00657, NA20760, NA19717, NA19663, NA19081, HG01498, NA12718, NA20519, NA18572, NA18948, NA18981, HG00692, NA19064, NA18548, HG01102, NA19084, HG00690, HG00404, NA12829, NA11893, NA19750, NA18532, NA06989, NA19059, HG01334, NA19009, HG00463, HG00126, NA19625, NA18593, HG01107, NA20799, NA19729, HG00611, NA19652, HG00336, NA19712, NA18564, NA18628, HG00580, NA19010, HG01174, NA12763, HG00662, NA18615, NA19785, NA19779, HG00267, NA18609, HG00112, NA19770, NA20826, HG00377, HG00628, NA18624, NA19065, NA19074, HG01437, HG00581, HG00593, HG00626, HG01060, HG00114, HG01441, HG00592, NA11995, NA18592, HG01359, HG01052, NA18980, HG00100, NA18561, HG01188, NA11933, NA18599, HG01389, HG00306, NA20813, NA18603, NA12045, HG00699, NA19819, NA20346, HG00150, NA12400, NA12341, HG01250, NA19746, NA19660, NA19076, NA19728, NA18595, HG00689, HG00173, NA19723, NA18635, HG00330, NA20769, HG00634, NA18942, HG00610, NA12287, HG00247, NA19054, NA19681, HG00590, NA20541, NA12761, HG01134, HG00277, HG00120, HG00683, HG01170, HG00262, NA19719, NA18560, NA18617, NA19087, NA12889, NA19725, HG00338, HG00178, NA18973, HG00530, HG00419, NA18638, NA12748, HG00464, HG00108, NA20818, NA19007, HG00543, HG00188, HG00149, HG00560, NA18613, HG00629, NA19657, HG01360, HG00176, NA19082, NA19077, NA20809, NA20536, HG00475, NA19982, HG00584, HG00500, NA19788, NA19000, NA19655, HG01182, NA20828, NA19756, NA18536, NA18576, NA19685, HG00476, NA20801, NA18535, NA11881, NA18952, NA18543, NA18559, NA12775, NA19749, NA18950, NA19732, HG01253, HG00136, NA07051, HG00607, NA20504, NA19786, HG00319, HG01108, NA20803, HG00125, NA20341, NA19818, NA19078, HG00672, HG00312, NA20582, NA18987, NA19713, HG00174, NA12830, NA18972, HG00343, NA18552, HG00372, HG00252, NA18984, HG00472, NA07056, NA19004, NA20322, HG01097, NA18549, HG00437, NA20509, NA12383, NA19701, NA20761, HG00542, NA12717, HG00143, NA19909, NA20766, NA12286, HG00671, NA19066, HG00242, NA10851, HG00559, NA20783, NA18565, HG00315, NA20816, NA20752, NA20802, HG00244, HG00181, NA18959, HG00737, NA18616, HG00654, NA20356, NA20771, NA12399, NA18602, HG01522, NA18988, NA18627, HG00663, NA07346, NA18940, HG00272, NA18597, HG01351, HG01168, NA18567, NA07347, HG00334, HG00185, NA19904, NA20539, NA12275, HG01069, HG01080, NA20518, NA12156, NA11932, HG00232, NA11994, HG00534, NA19722, NA18990, HG01048, NA20342, NA18539, NA20753, HG01124, HG00154, HG00443, HG00268, HG01171, HG00282, HG00557, HG00245, HG00368, NA20314, HG00556, HG00583, HG00263, HG00275, NA18579, NA18534, HG00324, HG00284, NA18573, HG00651, HG00250, NA18626, HG00479, NA20581, HG00684, NA18553, HG01497, NA19761, NA18555, HG00146, NA18963, HG00704, NA12144, HG00246, NA12546, HG01075, NA19012, NA12043, NA18953, NA19003, NA18632, HG00155, HG00254, HG00265, HG00625, NA20276, NA19747, HG00353, NA19072, NA12272, HG00734, NA20790, NA20530, NA19835, NA20792, NA20778, HG00237, HG01137, HG00418, NA18610, HG01489, HG00620, HG00339, HG00342, NA20510, NA20289, NA20786, NA11843, NA20758, NA19080, NA19780, NA19900, NA18983, NA20502, HG01125, HG00171, NA20585, NA19063, NA12154, NA19676, NA18620, HG01516, HG00403, HG01098, HG01356, NA20543, HG00536, HG00361, HG00524, NA19914, HG00187, HG00640, HG00367, HG00318, HG01465, HG00103, NA20805, NA19777, NA19057, NA18596, HG01456, HG00566, NA18606, HG00179, HG00177, NA12155, NA07357, HG01140, NA18967, NA20796, NA19005, NA18944, HG01070, HG00501, NA19762, HG01488, HG00448, NA20586, NA18982, NA12348, NA11992, HG00346, NA19771, NA19088, HG00369, HG00270, NA19782, NA18964, NA18611, HG01455, HG01067, NA20819, NA18977, HG01495, NA19731, NA18986, HG00309, HG00427, NA20533, NA11993, NA18614, NA11831, HG00313, HG00133, NA18544, HG00328, NA12003, HG00190, HG00653, HG00577, HG00701, HG00436, HG00320, HG00533, NA18637, NA18630, HG00619, HG00635, HG01390, NA18566, NA19774, NA11894, NA20538, NA12249, HG00117, HG00613, HG00525, HG00321, NA12827, HG00276, NA18634, NA20534, NA19675, NA20765, NA18546, NA18608, NA20773, NA18542, HG01190, NA18961, HG00366, NA18941, NA20804, HG01494, NA19085, NA06986, HG00269, NA20348, NA18971, HG01491, NA19060, HG00421, HG00698, HG00131, NA20528, HG01251, NA19661, NA19755, HG01082, HG01112, NA18622, NA18965
Known GenesKGFLP2
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)dgv1338e199
Frequency
Sample Size1151
Observed Gain0
Observed Loss532
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer