A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv1336e201



Internal ID22760694
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrY:26661303..26670858hg38UCSC Ensembl
chrY:28807450..28817005hg19UCSC Ensembl
CytobandYq12
Allele length
AssemblyAllele length
hg389556
hg199556
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2740803, esv2742115, esv2740825, esv2740885, esv2742152, esv2742575, esv2743307
SamplesSSM027, SSM079, SSM096, SSM032, SSM031, SSM080, SSM034
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)dgv1336e201
Frequency
Sample Size96
Observed Gain0
Observed Loss7
Observed Complex0
Frequencyn/a


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