A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv1334e201



Internal ID22760692
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrY:20055079..20154594hg38UCSC Ensembl
chrY:22216965..22316480hg19UCSC Ensembl
CytobandYq11.223
Allele length
AssemblyAllele length
hg3899516
hg1999516
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2740679, esv2740681
SamplesSSM100, SSM083, SSM027, SSM024, SSM075, SSM046, SSM079, SSM097, SSM093, SSM050, SSM042, SSM092, SSM084, SSM090, SSM021, SSM096, SSM062, SSM089, SSM017, SSM094, SSM032, SSM003, SSM031, SSM085, SSM081, SSM082, SSM078, SSM016, SSM053, SSM037, SSM077, SSM076, SSM091, SSM095, SSM034, SSM098, SSM030
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)dgv1334e201
Frequency
Sample Size96
Observed Gain0
Observed Loss37
Observed Complex0
Frequencyn/a


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