A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv1333e201



Internal ID22760691
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrY:11680497..11683299hg38UCSC Ensembl
chrY:13801203..13804005hg19UCSC Ensembl
CytobandYq11.21
Allele length
AssemblyAllele length
hg382803
hg192803
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2740661, esv2740657, esv2740664
SamplesSSM008, SSM027, SSM058, SSM084, SSM090, SSM018, SSM096, SSM017, SSM003, SSM067, SSM082, SSM078, SSM016, SSM053, SSM037, SSM055
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)dgv1333e201
Frequency
Sample Size96
Observed Gain0
Observed Loss16
Observed Complex0
Frequencyn/a


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