Variant DetailsVariant: dgv125n27Internal ID | 20132383 | Landmark | | Location Information | | Cytoband | 10q26.3 | Allele length | Assembly | Allele length | hg38 | 159493 | hg19 | 159493 | hg18 | 159493 | hg17 | 159493 |
| Variant Type | CNV gain | Copy Number | | Allele State | | Allele Origin | | Probe Count | | Validation Flag | | Merged Status | M | Merged Variants | | Supporting Variants | nsv467514, nsv467520, nsv467522, nsv467523, nsv467519, nsv467521, nsv467518 | Samples | HGDP00881, NINDS_89, HGDP00879, HGDP00388, HGDP01359, 1780854418_A, HGDP00534 | Known Genes | CYP2E1, MTG1, SCART1, SPRN, SYCE1 | Method | SNP array | Analysis | An HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives. | Platform | Not reported | Comments | | Reference | Itsara_et_al_2009 | Pubmed ID | 19166990 | Accession Number(s) | dgv125n27
| Frequency | Sample Size | 1557 | Observed Gain | 7 | Observed Loss | 0 | Observed Complex | 0 | Frequency | n/a |
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