A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv1254e201



Internal ID22760612
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:22057919..22058139hg38UCSC Ensembl
chr9:22057918..22058138hg19UCSC Ensembl
Cytoband9p21.3
Allele length
AssemblyAllele length
hg38221
hg19221
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2738285, esv2738283
SamplesSSM027, SSM024, SSM045, SSM087, SSM038, SSM073, SSM023, SSM028, SSM096, SSM026, SSM019, SSM031, SSM086, SSM085, SSM040, SSM020, SSM016, SSM005, SSM037, SSM010, SSM034, SSM004, SSM043, SSM052, SSM098
Known GenesCDKN2B-AS1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)dgv1254e201
Frequency
Sample Size96
Observed Gain0
Observed Loss25
Observed Complex0
Frequencyn/a


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