A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv121e55



Internal ID22761071
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr17:36097969..36150005hg38UCSC Ensembl
chr17:34425363..34477387hg19UCSC Ensembl
chr17:31449476..31501500hg18UCSC Ensembl
chr17:31449476..31501500hg17UCSC Ensembl
Cytoband17q12
Allele length
AssemblyAllele length
hg3852037
hg1952025
hg1852025
hg1752025
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2751660, esv2751628, esv2751667, esv2751632, esv34755, esv2751676, esv2751646, esv2751658, esv35093, esv34522, esv2751659, esv34894, esv34323, esv34872, esv35108, esv34889, esv35001, esv2751642, esv2751640, esv34759, esv34598, esv34761, esv2751630, esv34569, esv2751653, esv2751641, esv34529, esv2751663, esv34612, esv2751651, esv2751671, esv34700, esv2751639, esv2751668, esv35014, esv34314, esv34383, esv34556, esv2751657, esv2751670, esv34747, esv2751629, esv2751664, esv2751638, esv34772, esv2751669, esv2751633, esv2751661, esv2751631, esv2751650, esv2751672, esv2751674, esv2751636, esv34602, esv34338, esv34941, esv2751627, esv35032, esv34514, esv34841, esv34355, esv2751626, esv2751637, esv34523, esv2751673, esv34226, esv2751675, esv34397, esv2751652, esv2751662
SamplesBEC_304, BEC_738, NA11995, BEC_428, NA18861, BEC_16, NA18507, NA12004, BEC_543, BEC_716, NA18870, BEC_793, BEC_513, BEC_656, NA19201, BEC_373, NA18547, BEC_301, NA19131, NA18960, NA12762, NA18964, SPC_18, NA18970, NA19238, BEC_402, BEC_806, BEC_448, BEC_11, BEC_387, BEC_584, BEC_307, NA19194, NA18956, NA18515, NA18529, BEC_386, BEC_434, BEC_366, SPC_47, BEC_571, SPC_157, BEC_826, NA18853, NA15510, NA07345, SPC_168, BEC_714, BEC_730, NA19003, NA18978, NA18632, NA18517, NA18863, BEC_563, BEC_451, SPC_4, SPC_19, NA19100, BEC_713, NA10861, NA12874, SPC_189, BEC_776, NA19102, NA18854, NA18972, NA18872, SPC_23, BEC_353
Known GenesCCL4
MethodSNP array
Analysis
PlatformAffymetrix Mapping 250K Nsp SNP Array
Affymetrix Mapping 250K Sty2 SNP Array
Comments
ReferencePinto_et_al_2007
Pubmed ID17911159
Accession Number(s)dgv121e55
Frequency
Sample Size771
Observed Gain198
Observed Loss0
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer