A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv1110e199



Internal ID11593369
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:32642168..32658315hg38UCSC Ensembl
chr6:32609945..32626092hg19UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg3816148
hg1916148
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2672916, esv2666269
SamplesHG01357, NA19012, NA18621, HG00157, HG00252, HG01440, HG00257, NA18616, NA18951, NA20527, NA18534, HG01353, NA18630, NA19081, NA20752, NA20510, HG00112, HG00131, NA20544, NA20796, NA18526, NA20535, HG00155, NA20531, HG00160, NA18570, NA19072, HG00261, NA18545, NA18603, NA20802, HG01389, NA20775, NA18948, NA20759, HG01365, HG00117, HG01492, NA20800, NA18953, NA20816, HG01488, NA19010, HG01491, NA18573, HG00148, NA20786, NA18542, HG01350, HG00139, NA18541, HG00122, NA18546, HG00106, NA20588, NA20805, HG00111, NA18963, HG01461, NA19004, HG01134, HG00146, NA18965, NA19084, NA18557, NA20755, NA20521, HG00156, HG01551, NA18943, NA18626, NA18628, NA18949, HG00247, HG00256, NA18632, NA20770, HG00244, NA19077, NA20532, HG00154, NA19062, HG01550, HG00158, HG01148, NA19067, NA20505, HG00242, NA20533, HG01384, HG00250, HG01140, HG01456, NA18627, NA19059, NA19076, NA20819, HG01375, HG01378, NA18635, NA19057, NA19068, NA20811, HG00140, NA18576, NA18622, NA18960, HG00259, NA18618, HG00096, NA18623, NA20757, NA20530, NA18617, HG00231, NA18990, NA20783, HG01495, NA20801, NA20807, NA18636, NA20754, HG01124, NA19083, NA19088, HG00141, NA18638, NA18956, HG00149, NA19066, HG00150, NA20765, NA18547, HG00125, HG00258, HG01360, HG01113, HG01136, NA18637, NA18973, NA19075, NA20520, HG00264, NA18982, HG00243, NA19056, NA18634, NA20589, HG00237, NA19082, HG00133, NA18539, NA20773, HG00114, HG01497, NA19000, NA19055, NA20769, HG00159, HG01437, NA19080, HG00108, NA18537, NA18620, HG01465, HG00233, NA18633, NA20536, NA20760, NA20512, NA20790, NA20795, NA20826, NA18986, HG00263, NA20753, HG01455, HG00260, NA20540, NA18977, HG00239, NA18941, HG00265, HG01356, NA20814, HG00249, NA20818, NA18564, NA18942, NA18961, NA20828, NA18613, NA20797, HG01494, NA20766, HG00246, NA18562, NA19074, HG01383, NA18985, HG00236, NA18945, HG01149, NA18606, HG00151, NA18987, NA18582, NA18999, NA20525, NA20581, HG01137, NA18597, NA20537, NA20534, NA18983, NA18599, NA18567, HG01334, NA20799, NA18538, NA18565, NA19009, NA20518, HG00262, NA18631, NA18560, NA18989, NA18602, NA20509, NA18614, NA20507, NA20513, NA19064, HG00123, NA18944, NA19063, HG00142, HG01366, NA18571, NA20543, NA20758, HG01251, NA19070, NA18611, HG01125, HG00251, NA20768, HG00119, HG01498, NA20528, NA18532, NA18574, HG01374, NA18981, HG00137, HG01462, NA19079, NA20524, NA20804, HG01377, NA18615, NA20502, NA19087, NA20517, NA20772, NA20538, NA18555, NA19007, NA20519, HG00136, NA19065, HG00126, NA19058, NA18980, HG01354, NA18553, NA18964, HG00152, HG01359, NA20514, NA20522, NA20809, HG01250, NA20526, NA20785, HG00100, NA18561, NA20506, HG00127, NA18952, HG01342, NA20516, HG00245, NA20508, NA19060
Known GenesHLA-DQA1
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)dgv1110e199
Frequency
Sample Size1151
Observed Gain0
Observed Loss295
Observed Complex0
Frequencyn/a


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