A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv1108e199



Internal ID11593367
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:32551474..32583371hg38UCSC Ensembl
chr6:32519251..32551148hg19UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg3831898
hg1931898
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2660890, esv2659635, esv2671605, esv2674901, esv2678590, esv2659136, esv2661968, esv2656607
SamplesHG01357, HG00613, NA19012, NA18621, HG00309, NA19248, NA12154, HG00537, HG00252, NA18605, NA18616, HG00619, NA18534, HG01353, NA18630, HG00418, HG01519, NA12286, NA12342, HG00328, HG00437, HG00500, NA11920, HG01083, HG00112, HG00464, HG00131, NA20544, NA18526, NA20535, HG00160, NA11918, NA20346, NA18545, NA18603, HG01389, NA19319, HG00463, HG00657, NA18516, HG00614, HG01051, HG01365, NA19334, HG01082, NA18953, HG01488, NA18517, HG00428, HG00542, NA19920, HG01350, HG00139, NA18541, NA18546, HG00683, NA20805, HG00111, HG00334, HG00581, NA18963, HG00404, NA07051, HG00335, HG01134, HG01168, NA19257, NA19701, HG00699, NA18557, NA19472, NA20521, NA18943, HG01171, NA18628, NA20340, HG00592, NA19062, HG01550, NA19463, HG00556, HG01148, NA18627, HG00593, HG01375, HG00421, HG01378, NA18635, NA20811, NA18536, NA19675, NA18622, NA19443, NA18623, NA19471, HG01061, NA18617, NA18990, HG00692, HG01183, HG01124, NA18592, NA19083, HG00098, HG00533, NA18609, HG00125, HG01360, NA19985, NA18637, HG00634, NA18593, HG00276, HG00284, NA19457, NA12777, NA19700, NA20341, HG00662, NA19728, NA19190, NA19000, HG00267, NA19313, HG01437, HG01465, NA18633, NA20291, HG00653, NA18572, NA19374, NA20536, NA19375, NA19393, NA20760, HG00732, NA19373, HG00629, NA20795, NA20826, HG00255, NA18486, NA18986, HG00559, NA06986, NA18522, HG01455, NA19005, NA20334, NA19657, HG00560, NA19002, NA19713, HG00672, HG00282, HG01356, NA20818, HG00478, NA11892, NA18564, NA18858, HG00116, HG00277, HG00740, NA18613, NA20797, HG00513, HG00524, HG01494, NA18988, HG00153, HG00329, HG00512, HG00534, NA20766, HG00246, HG00525, NA12283, NA18562, HG01383, NA19789, HG00589, NA18945, NA18606, HG01094, NA18987, NA18582, NA20525, HG00427, HG01137, NA18597, NA20537, HG00595, NA18552, NA19376, NA20534, NA20756, NA18983, HG00443, NA18599, NA18909, NA18567, NA19078, HG00611, NA20332, NA20799, HG00650, NA06984, NA18538, NA18565, HG00663, NA12156, NA19116, HG00262, NA18631, NA18560, HG00580, NA19719, HG00448, NA18602, NA19818, HG00608, NA18577, NA20509, HG00654, NA18614, NA20513, HG00530, NA11830, HG00285, NA19063, HG00656, NA12546, NA12842, NA19655, HG01366, NA18499, NA18571, HG00422, NA18924, HG00708, NA19198, NA19916, HG01108, NA20758, HG01251, NA19470, HG00367, NA18984, NA20792, HG00693, HG00566, HG01125, HG01498, HG00324, HG00625, HG00690, NA18532, NA18574, HG00442, HG00473, HG01522, NA19350, HG01462, NA19381, NA19473, HG00626, HG01377, NA18615, HG01110, HG00476, HG00671, NA19087, NA20772, HG00702, NA18555, HG00278, NA19661, NA19779, NA18519, NA12775, NA19466, HG01354, NA18553, HG00327, HG00323, NA18964, NA19445, NA19625, HG00152, HG00734, HG01359, NA12249, HG00536, HG00607, NA07037, HG01250, NA20785, HG01075, NA18561, NA20506, NA07056, NA18874, HG01342, HG00596, NA19783, NA19401, NA20508, HG00449, NA18570, NA19003, NA19072, NA19455, NA06989, NA20802, NA19670, NA19317, HG00117, NA20816, HG00326, HG01491, NA18573, NA18608, NA20786, NA18542, HG00701, NA19834, NA20588, HG01461, HG00651, NA19678, HG00557, HG00578, HG00331, NA19474, NA19780, NA19467, HG01551, NA18873, NA19147, NA18626, HG00479, NA19438, HG01133, HG00256, NA18632, NA20770, HG00244, HG00543, HG00154, NA18559, NA19726, NA18912, NA12843, NA18624, HG00250, HG01140, HG01456, HG00472, HG00583, NA12383, NA18566, HG00337, NA11994, NA19057, NA19068, NA19660, NA12155, NA18576, NA18563, NA18618, NA19900, NA20504, HG00610, HG01495, NA20801, HG00689, HG00628, NA07048, NA18638, NA19440, NA19066, NA11933, NA20541, HG00150, NA19774, HG00419, NA18547, HG01113, HG01136, NA20282, HG00264, NA19658, NA12830, NA18634, NA19316, NA18539, HG01497, HG00436, HG00620, NA19785, HG00108, NA18620, NA19172, NA19759
Known GenesHLA-DRB1, HLA-DRB6
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)dgv1108e199
Frequency
Sample Size1151
Observed Gain0
Observed Loss405
Observed Complex0
Frequencyn/a


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