A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv1101e199



Internal ID22758874
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:32486418..32549915hg38UCSC Ensembl
chr6:32454195..32517692hg19UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg3863498
hg1963498
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2676068, esv2658503, esv2667015, esv2673171, esv2658893
SamplesHG00189, NA19701, HG00650, HG00542, HG00442, HG01173, NA19058, NA19703, HG01462, HG00608, NA19909, NA18621, HG00671, HG00559, NA18565, HG01066, HG00315, NA18999, HG00181, NA20294, NA20332, HG00737, NA18616, HG01518, HG00449, HG01461, HG00654, HG01051, NA20356, NA19920, NA18633, NA19067, NA18602, HG01522, HG00693, NA18988, NA18627, HG00337, HG00271, HG00663, NA18563, HG00641, HG01350, NA18940, HG00589, HG00272, NA18597, HG01351, HG01167, HG01168, NA18567, NA18547, HG01492, NA18960, NA18618, NA19062, NA18574, NA18582, NA18571, HG01083, HG01365, HG00334, NA20287, HG00185, HG00537, HG00311, NA20291, NA19079, NA18949, HG00512, HG00281, HG01069, HG01080, NA20278, HG00335, HG01519, HG00325, HG00534, HG00705, NA18990, HG01198, NA18557, HG01048, NA18985, NA20342, HG00326, NA20127, NA19985, HG01550, NA18539, NA19921, HG01124, NA18951, NA18605, NA19908, HG00731, HG00443, NA18538, HG00266, HG01171, HG00282, NA19056, HG00557, HG00732, HG01095, HG00657, HG00368, NA20314, HG00556, HG00583, HG01498, NA18572, HG01149, NA18948, NA18534, NA18981, HG00692, NA19064, NA18548, HG00740, HG01047, HG01102, HG00324, HG00284, HG00651, NA19084, NA18626, HG00690, HG00404, HG00531, HG00331, NA18532, HG01101, NA18553, HG01497, NA19009, NA18555, NA18963, HG00463, NA18570, NA19625, NA18593, HG01107, HG01075, NA19012, NA18953, HG01148, NA19003, HG00611, NA18632, HG00336, HG00625, NA20276, NA19712, NA18564, NA18628, NA19072, HG00580, HG01551, HG00734, NA19010, HG01357, HG01174, HG01375, NA19835, HG00473, HG01113, HG01137, NA19083, NA18943, NA20281, HG00418, NA18615, HG01489, HG01342, HG00620, HG00339, HG00614, HG00513, NA18631, HG00342, HG00267, NA20289, NA18609, HG00310, HG00280, NA19080, NA19711, NA18983, HG00274, HG00595, NA18989, HG01125, HG00628, HG00171, NA18623, NA19063, NA19065, NA18612, NA19074, HG00553, HG00581, NA18577, NA18620, HG01516, HG00626, HG00403, HG01060, HG01441, NA19700, HG00592, HG01521, HG01098, HG01356, NA19055, HG00536, HG00361, NA18592, HG01359, HG00524, NA19914, HG01052, NA18980, HG01079, NA18561, NA19704, HG01188, NA18599, HG01389, HG01374, HG00306, HG00640, HG00367, HG00318, HG01465, HG00699, NA19819, NA19057, NA18596, HG01456, HG00566, NA18606, HG00179, NA20346, HG00177, NA18526, HG01140, HG00327, NA18967, NA19068, HG01250, NA19076, NA19005, NA18944, HG01366, HG01070, HG00501, HG00702, HG00689, HG00448, HG00173, NA18635, NA20317, NA19916, HG00330, HG00634, NA18942, HG00736, HG00610, HG00346, HG01354, NA19088, NA19054, HG00369, HG00270, NA20336, HG00590, NA18611, HG01455, HG01067, HG00683, HG01170, NA18977, HG01495, NA19917, HG01072, NA20340, NA18560, NA18617, HG00422, HG01176, NA18986, NA19087, HG01440, HG00309, HG00182, NA19002, HG00427, NA19901, HG00637, HG00338, NA18975, NA18973, HG00530, HG00419, NA18638, HG00464, NA19007, NA18614, HG01353, HG00313, HG01183, HG01136, HG00188, HG00560, NA18613, HG00629, HG01360, HG00183, HG00176, HG01187, NA19707, HG00596, HG01384, HG00328, NA19077, HG00428, HG00190, HG00653, HG00577, HG00701, HG01515, HG00475, HG00436, NA19982, HG00320, HG00584, HG00533, NA18637, HG00500, NA20126, NA18976, NA18630, NA20344, HG00619, HG00708, HG00635, NA18566, HG01073, HG00273, NA20299, NA19000, HG00373, HG01197, HG01383, HG01182, HG00613, HG00525, HG00321, NA20282, HG00276, NA18536, NA18634, NA18945, HG01204, NA18576, NA18546, NA20296, NA18608, HG00476, NA18542, NA18535, HG01190, HG00285, NA19834, NA18961, NA18952, NA18559, HG00366, NA18950, HG00375, HG00357, HG01253, NA18941, HG00638, HG00278, HG01494, HG00607, HG00319, HG01108, NA19085, HG00269, NA20341, NA19818, NA19078, HG00707, HG00672, NA20348, HG00578, NA18971, HG01491, HG00312, NA19060, HG00421, HG00329, NA18987, HG00656, NA20334, NA19713, HG01254, HG01055, HG00174, HG00186, HG00698, HG00343, NA18552, HG01251, HG00372, HG01377, NA18984, HG00472, HG01378, NA19004, HG01082, NA20322, HG00345, HG01112, HG01097, HG00554, NA18549, HG01191, HG00180, NA18622, HG01061, HG00437, NA18562, NA18965
Known GenesHLA-DRB5
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)dgv1101e199
Frequency
Sample Size1151
Observed Gain0
Observed Loss437
Observed Complex0
Frequencyn/a


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