A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv107n27



Internal ID20132365
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:65012286..65372541hg38UCSC Ensembl
chr10:66772044..67132299hg19UCSC Ensembl
chr10:66442050..66802305hg18UCSC Ensembl
chr10:66442050..66802305hg17UCSC Ensembl
Cytoband10q21.3
Allele length
AssemblyAllele length
hg38360256
hg19360256
hg18360256
hg17360256
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv467298, nsv467297, nsv467300
SamplesHGDP00145, HGDP00076, HGDP00155
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)dgv107n27
Frequency
Sample Size1557
Observed Gain3
Observed Loss0
Observed Complex0
Frequencyn/a


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