A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv1079e201



Internal ID22760437
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr7:25600996..25602575hg38UCSC Ensembl
chr7:25640616..25642195hg19UCSC Ensembl
Cytoband7p15.2
Allele length
AssemblyAllele length
hg381580
hg191580
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2734145, esv2734146
SamplesSSM059, SSM008, SSM027, SSM087, SSM088, SSM058, SSM021, SSM029, SSM062, SSM026, SSM089, SSM031, SSM001, SSM086, SSM033, SSM006, SSM078, SSM053, SSM052, SSM056, SSM063, SSM012
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)dgv1079e201
Frequency
Sample Size96
Observed Gain0
Observed Loss22
Observed Complex0
Frequencyn/a


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