A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv1057e201



Internal ID22760415
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:170236421..170238203hg38UCSC Ensembl
chr6:170546211..170547291hg19UCSC Ensembl
Cytoband6q27
Allele length
AssemblyAllele length
hg381783
hg191081
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2733590, esv2733592
SamplesSSM083, SSM071, SSM027, SSM075, SSM046, SSM064, SSM093, SSM074, SSM023, SSM021, SSM069, SSM029, SSM096, SSM026, SSM089, SSM017, SSM019, SSM032, SSM031, SSM067, SSM001, SSM014, SSM086, SSM007, SSM015, SSM016, SSM098, SSM056
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)dgv1057e201
Frequency
Sample Size96
Observed Gain0
Observed Loss28
Observed Complex0
Frequencyn/a


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