A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv10489n54



Internal ID22778384
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:32462952..32689557hg38UCSC Ensembl
chr6:32430729..32657334hg19UCSC Ensembl
chr6:32538707..32765312hg18UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg38226606
hg19226606
hg18226606
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv602395, nsv602304, nsv602187, nsv602357, nsv602378, nsv602185, nsv602283, nsv602294, nsv602278, nsv602186, nsv602117, nsv602276, nsv602358, nsv602375, nsv602222, nsv602285, nsv602377, nsv602280, nsv602328, nsv602356, nsv602282, nsv602327, nsv602184, nsv602394, nsv602376, nsv602281, nsv602279, nsv602366, nsv602379, nsv602275
Samples
Known GenesHLA-DQA1, HLA-DQB1, HLA-DRB1, HLA-DRB5, HLA-DRB6
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)dgv10489n54
Frequency
Sample Size17421
Observed Gain0
Observed Loss48
Observed Complex0
Frequencyn/a


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