A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv1042e201



Internal ID11594886
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:168317756..168318004hg38UCSC Ensembl
chr6:168718436..168718684hg19UCSC Ensembl
Cytoband6q27
Allele length
AssemblyAllele length
hg38249
hg19249
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2741866, esv2733349
SamplesSSM027, SSM086, SSM036, SSM084, SSM071, SSM032, SSM039, SSM041, SSM011, SSM029, SSM037, SSM023, SSM079, SSM044, SSM075, SSM026
Known GenesDACT2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)dgv1042e201
Frequency
Sample Size96
Observed Gain0
Observed Loss16
Observed Complex0
Frequencyn/a


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