A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv1039e201



Internal ID11594883
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:168269786..168270247hg38UCSC Ensembl
chr6:168670466..168670927hg19UCSC Ensembl
Cytoband6q27
Allele length
AssemblyAllele length
hg38462
hg19462
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2733327, esv2733325
SamplesSSM065, SSM022, SSM007, SSM013, SSM082, SSM036, SSM091, SSM033, SSM040, SSM088, SSM089, SSM090, SSM035, SSM025, SSM072, SSM016, SSM024, SSM067, SSM083, SSM097, SSM041, SSM005, SSM085, SSM017, SSM009, SSM011, SSM066, SSM028, SSM095, SSM034, SSM019, SSM096, SSM023, SSM052, SSM068, SSM026, SSM076
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)dgv1039e201
Frequency
Sample Size96
Observed Gain0
Observed Loss37
Observed Complex0
Frequencyn/a


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