A curated catalogue of human genomic structural variation

Variant Details

Variant: dgv10346n54

Internal ID20143770
Location Information
TypeCoordinatesAssemblyOther Links
chr6:29883666..29925418hg38UCSC Ensembl
chr6:29851443..29893195hg19UCSC Ensembl
chr6:29959422..30001174hg18UCSC Ensembl
Allele length
AssemblyAllele length
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv601304, nsv601250, nsv601316, nsv601268, nsv601337, nsv601314, nsv601350, nsv601336, nsv601318, nsv601319, nsv601315, nsv601317, nsv601334, nsv601344, nsv601338, nsv601269
SamplesHGDP00845, HGDP00806, HGDP00548, HGDP00553, HGDP00588, HGDP00655, HGDP00234, HGDP00769, HGDP00859, HGDP00833, HGDP00574, HGDP00839, HGDP00094, HGDP00766, HGDP01263, HGDP00903, HGDP01099, HGDP00546, HGDP00840, HGDP00003, HGDP00035, HGDP00606, HGDP00835, HGDP00561, HGDP01208, HGDP00787, HGDP00868, HGDP00818, HGDP00490, HGDP01255, HGDP00954, HGDP01205, HGDP01203, HGDP01210, HGDP01042, 1780862384_A, HGDP00825, HGDP00663, HGDP00978, HGDP01206, HGDP00131, HGDP00834, HGDP00750, HGDP00838, HGDP01027, HGDP00850, HGDP01181, HGDP00547, HGDP01015, HGDP00851, HGDP00491, HGDP00837, HGDP00747, HGDP01182, HGDP00556, HGDP01239, HGDP00540, HGDP00772, HGDP01250, HGDP01211, HGDP00656, HGDP00658, HGDP00680, HGDP00841, HGDP00760, HGDP00189, HGDP00662, HGDP01054, HGDP00634, 1780854573_A, 1780862590_A, HGDP01228
Known GenesHCG4B, HLA-H
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Pubmed ID21841781
Accession Number(s)dgv10346n54
Sample Size17421
Observed Gain0
Observed Loss142
Observed Complex0

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