A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv1032e201



Internal ID20125919
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:163322799..163323268hg38UCSC Ensembl
chr6:163743831..163744300hg19UCSC Ensembl
Cytoband6q26
Allele length
AssemblyAllele length
hg38470
hg19470
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2733113, esv2733115
SamplesSSM022, SSM033, SSM084, SSM040, SSM043, SSM016, SSM032, SSM012, SSM100, SSM056, SSM085, SSM017, SSM066, SSM028, SSM047, SSM021, SSM038, SSM046, SSM019, SSM079, SSM068, SSM044, SSM015
Known GenesPACRG-AS1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)dgv1032e201
Frequency
Sample Size96
Observed Gain0
Observed Loss23
Observed Complex0
Frequencyn/a


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