A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv1029e201



Internal ID22760387
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:158704881..158705034hg38UCSC Ensembl
chr6:159125913..159126066hg19UCSC Ensembl
Cytoband6q25.3
Allele length
AssemblyAllele length
hg38154
hg19154
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2733007, esv2733004, esv2733009, esv2733011
SamplesSSM079, SSM039, SSM035, SSM032, SSM067, SSM086, SSM068, SSM080
Known GenesSYTL3
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)dgv1029e201
Frequency
Sample Size96
Observed Gain0
Observed Loss8
Observed Complex0
Frequencyn/a


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