A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv1028e201



Internal ID22760386
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:158704864..158705325hg38UCSC Ensembl
chr6:159125896..159126357hg19UCSC Ensembl
Cytoband6q25.3
Allele length
AssemblyAllele length
hg38462
hg19462
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2743268, esv2733005, esv2733012, esv2741900, esv2733010, esv2733008, esv2741211
SamplesSSM027, SSM045, SSM039, SSM088, SSM023, SSM028, SSM084, SSM029, SSM026, SSM035, SSM067, SSM014, SSM086, SSM033, SSM068, SSM081, SSM040, SSM072, SSM015, SSM016, SSM080, SSM070, SSM052, SSM098, SSM012
Known GenesSYTL3
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)dgv1028e201
Frequency
Sample Size96
Observed Gain0
Observed Loss25
Observed Complex0
Frequencyn/a


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